STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_1482FeS assembly SUF system protein, DUF59 family. (112 aa)    
Predicted Functional Partners:
sufC
ABC transporter, ATP-binding protein,iron-sulfur cluster assembly ATPase protein SufC.
 
  
 0.829
sufD
ABC transporter, iron-sulfur cluster assembly protein SufD.
 
   
 0.767
lp_1483
Transcription regulator, Xre family.
  
    0.721
sufB
ABC transporter component, iron-sulfur cluster assembly protein SufB, iron regulated.
 
   
 0.701
lp_2418
Prophage P2a protein 39; scaffold protein.
      
 0.678
sufU
SUF system FeS assembly protein, NifU family.
  
    0.615
mntH1
Manganese transport protein MntH, Nramp superfamily; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
  
  
 0.537
narK
Nitrite extrusion protein.
       0.534
moaA
Molybdopterin precursor synthase MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.532
moaE
Molybdopterin converting factor, large subunit.
     
 0.469
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.