STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_1539Lipoprotein precursor. (194 aa)    
Predicted Functional Partners:
lp_0932
Extracellular lipoprotein precursor.
  
  
 0.782
lp_1703
Diacylglycerol kinase family protein.
   
    0.704
lp_0209
RNA-binding protein, DUF814 family.
   
 
 0.690
lp_0923
Cell surface protein precursor, LPXTG-motif cell wall anchor.
  
    0.626
napA2
Na(+)/H(+) antiporter.
   
 
 0.587
lp_0988
Extracellular lipoprotein precursor, Asp-rich.
     
 0.566
lp_1163
Nucleotide-binding protein, universal stress protein UspA family.
   
  
 0.563
lp_1146
Lipoprotein, pheromone precursor.
      
 0.542
dak1A
Dihydroxyacetone phosphotransferase,dihydroxyacetone binding sub-unit.
   
  
 0.513
pcrA
ATP-dependent DNA helicase PcrA.
     
 0.510
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.