STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrp5Two-component system response regulator. (228 aa)    
Predicted Functional Partners:
hpk5
Two-component system histidine protein kinase; sensor protein.
 
 0.987
hpk11
Two component system histidine protein kinase; sensor protein.
 
 0.899
hpk7
Two-component system histidine protein kinase; sensor protein.
 
 0.870
hpk2
Two-component system histidine protein kinase; sensor protein.
 
 0.869
hpk1
Two-component system histidine protein kinase; sensor protein.
 
 0.838
hpk3
Two-component system histidine kinase, sensor protein, phosphate transport regulon.
 
 0.836
lamC
Two-component system histidine protein kinase; sensor protein.
  
 
 0.635
gnd2
Phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
  
 0.507
htrA
Serine protease HtrA.
 
  
 0.474
rarA
Recombination factor protein RarA; ATPase, AAA family.
       0.471
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.