STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adh1Alcohol dehydrogenase, zinc-binding. (347 aa)    
Predicted Functional Partners:
adhE
Bifunctional protein: alcohol dehydrogenase; acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.939
lp_0082
Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family protein.
 
 
 0.908
adh2
Alcohol dehydrogenase, zinc-binding.
  
 
 
0.905
calB
Coniferyl aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.759
aspAT
Aspartate aminotransferase.
   
  
 0.571
kat
Catalase; Belongs to the catalase family.
  
 
 0.421
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.420
lp_1664
Zinc-dependent amidohydrolase, M20 family.
       0.409
lp_1667
Hypothetical membrane protein.
       0.404
lp_1663
Hypothetical membrane protein.
       0.402
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.