Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dinG | dnaD | lp_1737 | lp_1741 | ATP-dependent helicase DinG; 3'-5' exonuclease. | DNA replication protein DnaD. | 0.800 |
| dinG | idi1 | lp_1737 | lp_1732 | ATP-dependent helicase DinG; 3'-5' exonuclease. | Isopentenyl diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.538 |
| dinG | lp_1738 | lp_1737 | lp_1738 | ATP-dependent helicase DinG; 3'-5' exonuclease. | Extracellular protein. | 0.872 |
| dinG | mvaD | lp_1737 | lp_1734 | ATP-dependent helicase DinG; 3'-5' exonuclease. | Diphosphomevalonate decarboxylase. | 0.565 |
| dinG | mvaK1 | lp_1737 | lp_1735 | ATP-dependent helicase DinG; 3'-5' exonuclease. | Mevalonate kinase. | 0.564 |
| dinG | mvaK2 | lp_1737 | lp_1733 | ATP-dependent helicase DinG; 3'-5' exonuclease. | Phosphomevalonate kinase. | 0.604 |
| dnaD | dinG | lp_1741 | lp_1737 | DNA replication protein DnaD. | ATP-dependent helicase DinG; 3'-5' exonuclease. | 0.800 |
| dnaD | idi1 | lp_1741 | lp_1732 | DNA replication protein DnaD. | Isopentenyl diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.435 |
| dnaD | lp_1738 | lp_1741 | lp_1738 | DNA replication protein DnaD. | Extracellular protein. | 0.809 |
| dnaD | lp_1891 | lp_1741 | lp_1891 | DNA replication protein DnaD. | Hypothetical protein. | 0.596 |
| dnaD | mvaD | lp_1741 | lp_1734 | DNA replication protein DnaD. | Diphosphomevalonate decarboxylase. | 0.463 |
| dnaD | mvaK1 | lp_1741 | lp_1735 | DNA replication protein DnaD. | Mevalonate kinase. | 0.461 |
| dnaD | mvaK2 | lp_1741 | lp_1733 | DNA replication protein DnaD. | Phosphomevalonate kinase. | 0.502 |
| idi1 | dinG | lp_1732 | lp_1737 | Isopentenyl diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | ATP-dependent helicase DinG; 3'-5' exonuclease. | 0.538 |
| idi1 | dnaD | lp_1732 | lp_1741 | Isopentenyl diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | DNA replication protein DnaD. | 0.435 |
| idi1 | lp_1738 | lp_1732 | lp_1738 | Isopentenyl diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Extracellular protein. | 0.443 |
| idi1 | mvaA | lp_1732 | lp_0447 | Isopentenyl diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family. | 0.940 |
| idi1 | mvaD | lp_1732 | lp_1734 | Isopentenyl diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Diphosphomevalonate decarboxylase. | 0.993 |
| idi1 | mvaK1 | lp_1732 | lp_1735 | Isopentenyl diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Mevalonate kinase. | 0.939 |
| idi1 | mvaK2 | lp_1732 | lp_1733 | Isopentenyl diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Phosphomevalonate kinase. | 0.992 |
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