STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_1764Muramoyl-tetrapeptide carboxypeptidase, S66 family. (359 aa)    
Predicted Functional Partners:
lp_1765
Acetyltransferase, GNAT family, N-terminal fragment.
  
    0.912
lp_1766
Acetyltransferase, GNAT family, C-terminal fragment.
  
    0.808
lp_1763
Glycosyltransferase.
 
    0.545
lp_1768
Muramoyl-tetrapeptide carboxypeptidase, S66 family.
 
   
0.498
panE
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.465
lp_1929
Hypothetical protein, DUF1722 family.
  
     0.418
cgs
Cysteine gamma synthase/O-succinylhomoserine (thiol)-lyase.
   
    0.403
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.