STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_1768Muramoyl-tetrapeptide carboxypeptidase, S66 family. (352 aa)    
Predicted Functional Partners:
metN1
D-methionine ABC transporter, ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
    0.702
lp_2768
Transport protein, major facilitator superfamily (MFS).
  
    0.698
lp_1767
Glycosyl hydrolase, family 25.
  
    0.582
lp_1745
D-methionine ABC transporter, permease protein.
   
    0.552
lp_1770
Hypothetical membrane protein.
  
    0.503
lp_1764
Muramoyl-tetrapeptide carboxypeptidase, S66 family.
 
   
0.498
lp_1771
ABC transporter, ATP-binding protein.
  
    0.492
lp_1766
Acetyltransferase, GNAT family, C-terminal fragment.
  
    0.489
lp_1082
Malate / lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
   
    0.487
lp_1374
Bifunctional protein: homocysteine methyltransferase (cobalamin-dependent); methylenetetrahydrofolate reductase.
   
    0.479
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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