STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_1774Alpha/beta hydrolase. (264 aa)    
Predicted Functional Partners:
lp_2923
Lipase/esterase.
  
  
 0.745
lp_0796
Carboxylesterase.
  
  
 0.728
lp_3561
Lipase/esterase.
  
  
 0.727
lp_3562
Lipase/esterase.
  
  
 0.727
lp_0973
Esterase (short chain).
  
  
 0.721
lp_0299
ABC transporter, ATP-binding protein.
  
    0.711
lp_1165
Cell surface hydrolase, DUF915 family.
      
 0.708
lp_0557
Serine/threonine protein phosphatase.
  
 0.583
lp_0163
acyl-CoA dehydrogenase domain protein.
  
 
 0.566
lp_1776
Oxidoreductase, FAD-dependent.
 
 
 
 0.564
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.