STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_1803Transport protein, major facilitator subfamily (MFS). (395 aa)    
Predicted Functional Partners:
lp_2768
Transport protein, major facilitator superfamily (MFS).
  
    0.601
lp_1805
Hypothetical protein.
 
     0.488
lp_0098
Adenylyl transferase; Mediates bacterial resistance to the antibiotics streptomycin and spectomycin.
  
   
 0.456
lp_2917
Transport protein, major facilitator superfamily (MFS).
  
     0.448
lp_0128
Transcription regulator, MarR family.
  
     0.446
lp_1806
Hypothetical protein, DUF960 family.
 
    0.440
lp_2907
Acetyltransferase, GNAT family.
  
    0.439
lp_2084
Transport protein, major facilitator superfamily (MFS).
  
     0.425
lp_1643
Mucus-binding protein precursor, LPXTG-motif cell wall anchor.
  
  
 0.406
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.