STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_1805Hypothetical protein. (110 aa)    
Predicted Functional Partners:
lp_1806
Hypothetical protein, DUF960 family.
  
    0.698
lp_2485
Hypothetical protein, DUF1975 family.
  
     0.649
lp_3184
Branched-chain amino acid transport protein.
  
    0.536
lp_2230
Hypothetical protein.
  
    0.531
lp_1257
Hypothetical protein.
  
    0.529
lp_1388
Hypothetical protein.
  
    0.516
lp_3305
Hypothetical protein.
  
    0.516
cps3G
Polysaccharide biosynthesis membrane protein.
  
     0.497
lp_1293
Metallo-phosphoesterase.
  
    0.496
lp_1803
Transport protein, major facilitator subfamily (MFS).
 
     0.488
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.