Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lp_1815Hypothetical membrane protein. (449 aa)    
Predicted Functional Partners:
lp_3450
Cell surface protein, CscC family.
  
    0.791
lp_0297
Extracellular protein, CscC family.
  
    0.785
lp_2925
Cell surface protein precursor, LPXTG-motif cell wall anchor.
  
    0.776
wapA
Cell surface protein precursor, LPXTG-motif cell wall anchor.
  
     0.773
lp_2396
Extracellular protein, DUF 1093 family,membrane-bound.
  
     0.770
lp_3676
Cell surface protein precursor, CscC family.
  
     0.770
lp_3139
Hypothetical membrane protein, DUF805 family.
  
    0.769
lp_3245
Hypothetical protein.
  
     0.769
lp_0838
Hypothetical membrane protein.
  
     0.766
lp_1767
Glycosyl hydrolase, family 25.
  
     0.766
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.