STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_1859NADP oxidoreductase coenzyme, F420-dependent. (232 aa)    
Predicted Functional Partners:
lp_1860
Flavin monooxygenase, luciferase-like monooxygenase family.
 
  
 0.972
lp_2887
NADP oxidoreductase, coenzyme F420-dependent.
  
    0.742
lp_0244
NADPH-dependent FMN reductase family protein.
   
    0.541
mrr
Mrr restriction system protein.
  
    0.466
lp_2792
Oxidoreductase.
  
    0.435
lp_1863
Drug resistance transport protein, major facilitator subfamily (MFS), EmrB/QacA subfamily.
       0.411
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.