Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroE | cmk | lp_2035 | lp_1883 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Cytidylate kinase. | 0.926 |
| aroE | tyrA | lp_2035 | lp_2034 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Prephenate dehydrogenase. | 0.998 |
| cmk | aroE | lp_1883 | lp_2035 | Cytidylate kinase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.926 |
| cmk | der | lp_1883 | lp_1881 | Cytidylate kinase. | Ribosome-associated GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.994 |
| cmk | ndk | lp_1883 | lp_0242 | Cytidylate kinase. | Nucleoside-diphosphate kinase; Belongs to the NDK family. | 0.948 |
| cmk | nrdE | lp_1883 | lp_0693 | Cytidylate kinase. | Ribonucleoside-diphosphate reductase, alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.931 |
| cmk | nrdF | lp_1883 | lp_0692 | Cytidylate kinase. | Ribonucleoside-diphosphate reductase, beta chain. | 0.933 |
| cmk | rluB | lp_1883 | lp_1888 | Cytidylate kinase. | 16S rRNA pseudouridylate synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.959 |
| cmk | rpsA | lp_1883 | lp_1882 | Cytidylate kinase. | 30S ribosomal protein S1. | 0.977 |
| cmk | scpB | lp_1883 | lp_1889 | Cytidylate kinase. | Chromosome segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.978 |
| cmk | tyrA | lp_1883 | lp_2034 | Cytidylate kinase. | Prephenate dehydrogenase. | 0.910 |
| cmk | udk | lp_1883 | lp_1562 | Cytidylate kinase. | Uridine kinase. | 0.934 |
| der | cmk | lp_1881 | lp_1883 | Ribosome-associated GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Cytidylate kinase. | 0.994 |
| der | rluB | lp_1881 | lp_1888 | Ribosome-associated GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 16S rRNA pseudouridylate synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.881 |
| der | rpsA | lp_1881 | lp_1882 | Ribosome-associated GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 30S ribosomal protein S1. | 0.727 |
| der | scpB | lp_1881 | lp_1889 | Ribosome-associated GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Chromosome segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.716 |
| ndk | cmk | lp_0242 | lp_1883 | Nucleoside-diphosphate kinase; Belongs to the NDK family. | Cytidylate kinase. | 0.948 |
| ndk | nrdE | lp_0242 | lp_0693 | Nucleoside-diphosphate kinase; Belongs to the NDK family. | Ribonucleoside-diphosphate reductase, alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.920 |
| ndk | nrdF | lp_0242 | lp_0692 | Nucleoside-diphosphate kinase; Belongs to the NDK family. | Ribonucleoside-diphosphate reductase, beta chain. | 0.918 |
| ndk | rpsA | lp_0242 | lp_1882 | Nucleoside-diphosphate kinase; Belongs to the NDK family. | 30S ribosomal protein S1. | 0.522 |
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