Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fba | fruK | lp_0330 | lp_2096 | Fructose-bisphosphate aldolase. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.962 |
| fba | pfk | lp_0330 | lp_1898 | Fructose-bisphosphate aldolase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.991 |
| fba | pgi | lp_0330 | lp_2502 | Fructose-bisphosphate aldolase. | Glucose-6-phosphate isomerase. | 0.990 |
| fba | pyk | lp_0330 | lp_1897 | Fructose-bisphosphate aldolase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.984 |
| fba | tkt2 | lp_0330 | lp_1083 | Fructose-bisphosphate aldolase. | Transketolase; Belongs to the transketolase family. | 0.948 |
| fba | tpiA | lp_0330 | lp_0791 | Fructose-bisphosphate aldolase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.995 |
| fruK | fba | lp_2096 | lp_0330 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | Fructose-bisphosphate aldolase. | 0.962 |
| fruK | mtlD | lp_2096 | lp_0233 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | Mannitol-1-phosphate 5-dehydrogenase. | 0.638 |
| fruK | pfk | lp_2096 | lp_1898 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.973 |
| fruK | pgi | lp_2096 | lp_2502 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | Glucose-6-phosphate isomerase. | 0.631 |
| fruK | pyk | lp_2096 | lp_1897 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.657 |
| fruK | sacK1 | lp_2096 | lp_0184 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | Fructokinase. | 0.520 |
| mtlD | fruK | lp_0233 | lp_2096 | Mannitol-1-phosphate 5-dehydrogenase. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.638 |
| mtlD | pfk | lp_0233 | lp_1898 | Mannitol-1-phosphate 5-dehydrogenase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.926 |
| mtlD | pmi | lp_0233 | lp_2384 | Mannitol-1-phosphate 5-dehydrogenase. | Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family. | 0.922 |
| mtlD | sacK1 | lp_0233 | lp_0184 | Mannitol-1-phosphate 5-dehydrogenase. | Fructokinase. | 0.911 |
| mtlD | sacK2 | lp_0233 | lp_3637 | Mannitol-1-phosphate 5-dehydrogenase. | Fructokinase. | 0.912 |
| pfk | fba | lp_1898 | lp_0330 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | Fructose-bisphosphate aldolase. | 0.991 |
| pfk | fruK | lp_1898 | lp_2096 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.973 |
| pfk | mtlD | lp_1898 | lp_0233 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | Mannitol-1-phosphate 5-dehydrogenase. | 0.926 |
page 1 of 4