Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dgk | era | lp_1968 | lp_1967 | Diacylglycerol kinase. | Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.905 |
| dgk | glyQ | lp_1968 | lp_1965 | Diacylglycerol kinase. | glycine-tRNA synthetase, alpha chain. | 0.504 |
| dgk | lp_1315 | lp_1968 | lp_1315 | Diacylglycerol kinase. | Membrane-associated phospholipid phosphatase. | 0.918 |
| dgk | lp_1972 | lp_1968 | lp_1972 | Diacylglycerol kinase. | Hypothetical protein. | 0.601 |
| dgk | mraY | lp_1968 | lp_2199 | Diacylglycerol kinase. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.905 |
| dgk | phoH | lp_1968 | lp_1970 | Diacylglycerol kinase. | Phosphate starvation-inducible protein. | 0.917 |
| dgk | recO | lp_1968 | lp_1966 | Diacylglycerol kinase. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.903 |
| dgk | rpsU | lp_1968 | lp_1973 | Diacylglycerol kinase. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.497 |
| dgk | uppP | lp_1968 | lp_3407 | Diacylglycerol kinase. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.919 |
| dgk | ybeY | lp_1968 | lp_1969 | Diacylglycerol kinase. | Metal-binding protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.980 |
| era | dgk | lp_1967 | lp_1968 | Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Diacylglycerol kinase. | 0.905 |
| era | glyQ | lp_1967 | lp_1965 | Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | glycine-tRNA synthetase, alpha chain. | 0.618 |
| era | lp_1972 | lp_1967 | lp_1972 | Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Hypothetical protein. | 0.621 |
| era | phoH | lp_1967 | lp_1970 | Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Phosphate starvation-inducible protein. | 0.913 |
| era | recO | lp_1967 | lp_1966 | Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.946 |
| era | rpsU | lp_1967 | lp_1973 | Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.511 |
| era | ybeY | lp_1967 | lp_1969 | Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Metal-binding protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.997 |
| glyQ | dgk | lp_1965 | lp_1968 | glycine-tRNA synthetase, alpha chain. | Diacylglycerol kinase. | 0.504 |
| glyQ | era | lp_1965 | lp_1967 | glycine-tRNA synthetase, alpha chain. | Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.618 |
| glyQ | phoH | lp_1965 | lp_1970 | glycine-tRNA synthetase, alpha chain. | Phosphate starvation-inducible protein. | 0.553 |
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