ybeY protein (Lactobacillus plantarum) - STRING interaction network

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ybeY

Metal-binding protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (159 aa)

Predicted Functional Partners:

era

0.996

phoH

0.994

dgk

0.980

rrp2

0.868

fur

0.864

recO

0.830

rplQ

0.780

topA

0.763

rnj-2

0.758

rplU

0.721

Your Current Organism:

Lactobacillus plantarum

NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dgk	era	lp_1968	lp_1967	Diacylglycerol kinase.	Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.889
dgk	phoH	lp_1968	lp_1970	Diacylglycerol kinase.	Phosphate starvation-inducible protein.	0.913
dgk	recO	lp_1968	lp_1966	Diacylglycerol kinase.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.893
dgk	ybeY	lp_1968	lp_1969	Diacylglycerol kinase.	Metal-binding protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.980
era	dgk	lp_1967	lp_1968	Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Diacylglycerol kinase.	0.889
era	phoH	lp_1967	lp_1970	Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Phosphate starvation-inducible protein.	0.889
era	recO	lp_1967	lp_1966	Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.940
era	topA	lp_1967	lp_1850	Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]	0.610
era	ybeY	lp_1967	lp_1969	Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Metal-binding protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.996
fur	rrp2	lp_3247	lp_0283	Ferric uptake regulator; Belongs to the Fur family.	Two-component system response regulator.	0.876
fur	ybeY	lp_3247	lp_1969	Ferric uptake regulator; Belongs to the Fur family.	Metal-binding protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.864
phoH	dgk	lp_1970	lp_1968	Phosphate starvation-inducible protein.	Diacylglycerol kinase.	0.913
phoH	era	lp_1970	lp_1967	Phosphate starvation-inducible protein.	Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.889
phoH	recO	lp_1970	lp_1966	Phosphate starvation-inducible protein.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.976
phoH	ybeY	lp_1970	lp_1969	Phosphate starvation-inducible protein.	Metal-binding protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.994
recO	dgk	lp_1966	lp_1968	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	Diacylglycerol kinase.	0.893
recO	era	lp_1966	lp_1967	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	Ribosome biogenesis GTPase, Era subfamily; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.940
recO	phoH	lp_1966	lp_1970	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	Phosphate starvation-inducible protein.	0.976
recO	topA	lp_1966	lp_1850	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]	0.572
recO	ybeY	lp_1966	lp_1969	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	Metal-binding protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.830

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