Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| lp_0624 | lp_1997 | lp_0624 | lp_1997 | Prophage P1 protein 1, integrase; Belongs to the 'phage' integrase family. | Integrase, fragment. | 0.497 |
| lp_1995 | lp_1997 | lp_1995 | lp_1997 | Lipoprotein precursor. | Integrase, fragment. | 0.435 |
| lp_1997 | lp_0624 | lp_1997 | lp_0624 | Integrase, fragment. | Prophage P1 protein 1, integrase; Belongs to the 'phage' integrase family. | 0.497 |
| lp_1997 | lp_1995 | lp_1997 | lp_1995 | Integrase, fragment. | Lipoprotein precursor. | 0.435 |
| lp_1997 | lp_2455 | lp_1997 | lp_2455 | Integrase, fragment. | Prophage P2a protein 2, integrase; Belongs to the 'phage' integrase family. | 0.486 |
| lp_1997 | orf1 | lp_1997 | gene:17769016 | Integrase, fragment. | DNA-damage-inducible gene. | 0.575 |
| lp_1997 | orf14 | lp_1997 | gene:17769029 | Integrase, fragment. | Hypothetical protein. | 0.503 |
| lp_1997 | orf6 | lp_1997 | gene:17769021 | Integrase, fragment. | Hypothetical protein. | 0.632 |
| lp_1997 | orf8 | lp_1997 | gene:17769023 | Integrase, fragment. | Hypothetical protein. | 0.546 |
| lp_1997 | orf9 | lp_1997 | gene:17769024 | Integrase, fragment. | Hypothetical protein. | 0.622 |
| lp_1997 | plnQ | lp_1997 | lp_0413 | Integrase, fragment. | Plantaricin biosynthesis protein PlnQ. | 0.430 |
| lp_1997 | radA | lp_1997 | lp_0606 | Integrase, fragment. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.441 |
| lp_2455 | lp_1997 | lp_2455 | lp_1997 | Prophage P2a protein 2, integrase; Belongs to the 'phage' integrase family. | Integrase, fragment. | 0.486 |
| orf1 | lp_1997 | gene:17769016 | lp_1997 | DNA-damage-inducible gene. | Integrase, fragment. | 0.575 |
| orf1 | orf14 | gene:17769016 | gene:17769029 | DNA-damage-inducible gene. | Hypothetical protein. | 0.702 |
| orf1 | orf6 | gene:17769016 | gene:17769021 | DNA-damage-inducible gene. | Hypothetical protein. | 0.709 |
| orf1 | orf8 | gene:17769016 | gene:17769023 | DNA-damage-inducible gene. | Hypothetical protein. | 0.706 |
| orf1 | orf9 | gene:17769016 | gene:17769024 | DNA-damage-inducible gene. | Hypothetical protein. | 0.708 |
| orf14 | lp_1997 | gene:17769029 | lp_1997 | Hypothetical protein. | Integrase, fragment. | 0.503 |
| orf14 | orf1 | gene:17769029 | gene:17769016 | Hypothetical protein. | DNA-damage-inducible gene. | 0.702 |
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