Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| hbsU | lp_1459 | lp_1879 | lp_1459 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Extracellular protein, membrane-anchored. | 0.551 |
| hbsU | lp_2061 | lp_1879 | lp_2061 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.594 |
| hbsU | lp_2083 | lp_1879 | lp_2083 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein, DUF74 family; Belongs to the UPF0145 family. | 0.564 |
| hbsU | rpsO | lp_1879 | lp_2125 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.808 |
| hbsU | rpsT | lp_1879 | lp_2126 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.849 |
| hbsU | trxA2 | lp_1879 | lp_2270 | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Thioredoxin; Belongs to the thioredoxin family. | 0.533 |
| lp_1459 | hbsU | lp_1459 | lp_1879 | Extracellular protein, membrane-anchored. | DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.551 |
| lp_1459 | lp_1577 | lp_1459 | lp_1577 | Extracellular protein, membrane-anchored. | Hypothetical extracellular protein. | 0.666 |
| lp_1459 | lp_2061 | lp_1459 | lp_2061 | Extracellular protein, membrane-anchored. | Hypothetical protein. | 0.773 |
| lp_1459 | lp_2083 | lp_1459 | lp_2083 | Extracellular protein, membrane-anchored. | Hypothetical protein, DUF74 family; Belongs to the UPF0145 family. | 0.506 |
| lp_1459 | lp_2230 | lp_1459 | lp_2230 | Extracellular protein, membrane-anchored. | Hypothetical protein. | 0.572 |
| lp_1459 | rpsT | lp_1459 | lp_2126 | Extracellular protein, membrane-anchored. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.542 |
| lp_1459 | trxA2 | lp_1459 | lp_2270 | Extracellular protein, membrane-anchored. | Thioredoxin; Belongs to the thioredoxin family. | 0.546 |
| lp_1577 | lp_1459 | lp_1577 | lp_1459 | Hypothetical extracellular protein. | Extracellular protein, membrane-anchored. | 0.666 |
| lp_1577 | lp_1708 | lp_1577 | lp_1708 | Hypothetical extracellular protein. | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | 0.555 |
| lp_1577 | lp_2061 | lp_1577 | lp_2061 | Hypothetical extracellular protein. | Hypothetical protein. | 0.716 |
| lp_1577 | lp_2083 | lp_1577 | lp_2083 | Hypothetical extracellular protein. | Hypothetical protein, DUF74 family; Belongs to the UPF0145 family. | 0.702 |
| lp_1577 | rpsO | lp_1577 | lp_2125 | Hypothetical extracellular protein. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.658 |
| lp_1577 | rpsT | lp_1577 | lp_2126 | Hypothetical extracellular protein. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.671 |
| lp_1577 | trxA2 | lp_1577 | lp_2270 | Hypothetical extracellular protein. | Thioredoxin; Belongs to the thioredoxin family. | 0.707 |
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