STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2098Metallophosphoesterase, lipoprotein precursor. (440 aa)    
Predicted Functional Partners:
lp_1070
Lipoprotein precursor, FMN-binding protein.
  
    0.720
lp_3417
Transcription regulator, TetR family.
  
  
 0.689
lp_0381
Ankyrin repeat family protein.
   
 
 0.687
lp_0154
Transcription regulator, PadR family.
  
    0.667
lp_1068
Extracellular protein, DUF1312 famliy.
 
     0.646
hepA
Heptaprenyl diphosphate synthase component I.
 
     0.622
ndh2
NADH dehydrogenase, membrane-anchored.
  
     0.583
fruA
PTS system, fructose-specific EIIABC component.
  
    0.496
fruR
Transcription regulator, DeoR family, fructose operon.
  
    0.484
fruK
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
    0.473
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.