STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cps4GGlycosyltransferase, family 1 (GT1). (342 aa)    
Predicted Functional Partners:
cps4F
Glycosyltransferase, family 1 (GT1).
 
  
 0.970
cps4I
Glycosyltransferase, family 2 (GT2).
 
  
 0.957
cps4D
UDP N-acetyl glucosamine 4-epimerase, NAD dependent.
 
  
 0.913
cps4E
Polysaccharide biosynthesis polyprenyl glycosylphosphotransferase, priming glycosyltransferase.
  
  
 0.902
cps4H
Polysaccharide polymerase.
  
  
 0.894
cps4J
Polysaccharide repeat unit transporter (flippase).
 
  
 0.885
cps4A
Polysaccharide biosynthesis protein, chain length regulator.
  
  
 0.854
cps4C
Polysaccharide biosynthesis protein; phosphatase.
  
  
 0.847
cps4B
Polysaccharide biosynthesis protein.
  
  
 0.809
cps2D
UDP N-acetyl glucosamine 4-epimerase, NAD dependent.
 
  
 0.689
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.