STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cps4CPolysaccharide biosynthesis protein; phosphatase. (264 aa)    
Predicted Functional Partners:
cps4B
Polysaccharide biosynthesis protein.
  
 0.984
cps4A
Polysaccharide biosynthesis protein, chain length regulator.
 
 
 0.980
cps2B
Polysaccharide biosynthesis protein,regulator.
  
 0.941
cps2A
Polysaccharide biosynthesis protein, chain length regulator.
 
 
 0.933
cps2C
Polysaccharide biosynthesis protein,phosphotyrosine-protein phosphatase.
  
 
 
0.904
ptp1
Protein-tyrosine phosphatase.
   
 
 0.903
ptp3
Protein-tyrosine phosphatase.
     
  0.900
ptp2
Protein-tyrosine phosphatase.
     
  0.900
cps4F
Glycosyltransferase, family 1 (GT1).
  
  
 0.863
cps4E
Polysaccharide biosynthesis polyprenyl glycosylphosphotransferase, priming glycosyltransferase.
  
  
 0.859
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.