STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lonExtracellular protease Lon, peptidase S16 family, membrane-bound. (348 aa)    
Predicted Functional Partners:
kdtB
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
  
 0.968
comEA
ComE operon protein 1, DNA receptor.
     0.886
lp_2134
N6-adenine-specific methylase.
  
    0.864
lp_2135
Hypothetical protein, DUF2129 family.
  
    0.848
comEC
ComE operon protein 3, DNA transport protein.
 
    0.697
holA
DNA-directed DNA polymerase III, delta chain.
  
    0.687
ftsW
Cell division protein FtsW; Belongs to the SEDS family.
  
    0.646
pycA
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
    0.616
comEB
ComE operon protein 1, dCMP deaminase.
  
    0.576
lp_1867
Extracellular lipase/acylhydrolase with GDSL-like motif.
  
    0.516
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.