STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ica2Glycosyltransferase, family 2 (GT2), TIGR03111 family. (450 aa)    
Predicted Functional Partners:
lp_2143
Exosortase (transpeptidase), TIGR03110 family.
 
  
 0.963
lp_2141
Hypothetical membrane protein, TIGR03766 family.
 
  
 0.904
lp_0052
6-pyruvoyl-tetrahydropterin synthase family protein.
 
  
 0.825
lp_2145
Extracellular protein, cell-wall anchored.
 
    0.810
lp_2397
Prophage P2a protein 59; extracellular polysaccharide deacetylase, lipid-anchored.
 
  
 0.716
lp_2121
Hypothetical protein.
 
 
 0.677
lp_2169
Hypothetical protein.
  
 
 0.672
lp_2824
Purine nucleoside transporter.
  
 
 0.654
hprT
Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.652
lp_2929
Diguanylate cyclase/phosphodiesterase, GGDEF domain.
 
  
 0.478
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.