STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
suhBMyo-inositol-1(or 4)-monophosphatase. (257 aa)    
Predicted Functional Partners:
lp_2149
Hypothetical protein; Belongs to the UPF0223 family.
 
  
 0.950
lp_3605
Myo-inositol 2-dehydrogenase-like (promiscuous).
  
 
 0.912
iolG
Myo-inositol 2-dehydrogenase (promiscuous); Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.
  
 
 0.912
lp_3608
Myo-inositol 2-dehydrogenase-like (promiscuous).
  
 
 0.912
lp_3612
Myo-inositol 2-dehydrogenase-like (promiscuous).
  
 
 0.912
lp_2150
malate/L-lactate/L-2-hydroxyisocapronate dehydrogenase.
  
 
 0.868
sunL
16S rRNA m(5)C 967 methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.732
nusA
Transcription termination-antitermination factor NusA; Participates in both transcription termination and antitermination.
   
   0.715
typA
Translation elongation factor, GTPase,TypA/BipA family.
  
  
 0.711
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.656
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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