Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pbp2BTranspeptidase, penicillin binding protein 2B. (713 aa)    
Predicted Functional Partners:
pbp2A
Transpeptidase-transglycosylase (penicillin binding protein 2A).
 
 0.996
ftsW
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.989
pbp1A
Transpeptidase-transglycosylase (penicillin binding protein 1A).
 
0.982
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
 0.976
pbp2x
Transpeptidase (penicillin binding protein 2B).
  
 
0.970
rodA2
Rod-shape determining protein; Belongs to the SEDS family.
 
 0.969
ftsQ
Cell division initiation protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
 
 
 0.966
dacA1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
 
 
 0.951
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
 
 0.945
dacA2
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
 
 
 0.940
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.