STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2212NADH-flavin reductase. (215 aa)    
Predicted Functional Partners:
lp_0603
Acetyltransferase, GNAT family.
  
    0.581
aad
D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. Belongs to the peptidase M15D family.
   
    0.549
lp_2826
Dihydrofolate reductase family protein.
  
    0.537
lp_1708
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
   
    0.531
dtpT
Di-/tripeptide transport protein.
   
    0.493
lp_0273
Transcription regulator, Rrf2 family.
  
  
 0.487
lp_3588
Transcription regulator, Rrf2 family.
  
  
 0.480
lp_1081
Hypothetical protein.
  
    0.458
lp_1521
Alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
   
    0.437
lp_2503
Sugar transport protein.
  
    0.434
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.