lp_2276 protein (Lactobacillus plantarum) - STRING interaction network

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Score

lp_2276

Hypothetical protein. (114 aa)

Predicted Functional Partners:

alaS

0.787

lp_2274

0.685

lp_2275

0.685

lp_2273

0.672

zapA

0.463

rhe3

0.430

lp_2279

0.430

Your Current Organism:

Lactobacillus plantarum

NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
alaS	lp_2273	lp_2277	lp_2273	alanine-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity); Belongs to the class-II aminoacyl-tRNA synthetase family.	Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family.	0.773
alaS	lp_2274	lp_2277	lp_2274	alanine-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity); Belongs to the class-II aminoacyl-tRNA synthetase family.	Endonuclease, resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	0.920
alaS	lp_2275	lp_2277	lp_2275	alanine-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity); Belongs to the class-II aminoacyl-tRNA synthetase family.	Hypothetical protein, DUF965 family; Belongs to the UPF0297 family.	0.804
alaS	lp_2276	lp_2277	lp_2276	alanine-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity); Belongs to the class-II aminoacyl-tRNA synthetase family.	Hypothetical protein.	0.787
alaS	lp_2279	lp_2277	lp_2279	alanine-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity); Belongs to the class-II aminoacyl-tRNA synthetase family.	Phosphoesterase, DHH family.	0.592
alaS	rhe3	lp_2277	lp_2278	alanine-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity); Belongs to the class-II aminoacyl-tRNA synthetase family.	ATP-dependent RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.	0.655
alaS	zapA	lp_2277	lp_2272	alanine-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity); Belongs to the class-II aminoacyl-tRNA synthetase family.	Cell-division Z-ring component, stimulator of FtsZ polymerization.	0.497
lp_2273	alaS	lp_2273	lp_2277	Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family.	alanine-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity); Belongs to the class-II aminoacyl-tRNA synthetase family.	0.773
lp_2273	lp_2274	lp_2273	lp_2274	Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family.	Endonuclease, resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	0.879
lp_2273	lp_2275	lp_2273	lp_2275	Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family.	Hypothetical protein, DUF965 family; Belongs to the UPF0297 family.	0.862
lp_2273	lp_2276	lp_2273	lp_2276	Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family.	Hypothetical protein.	0.672
lp_2273	lp_2279	lp_2273	lp_2279	Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family.	Phosphoesterase, DHH family.	0.649
lp_2273	rhe3	lp_2273	lp_2278	Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family.	ATP-dependent RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.	0.456
lp_2273	zapA	lp_2273	lp_2272	Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family.	Cell-division Z-ring component, stimulator of FtsZ polymerization.	0.656
lp_2274	alaS	lp_2274	lp_2277	Endonuclease, resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	alanine-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity); Belongs to the class-II aminoacyl-tRNA synthetase family.	0.920
lp_2274	lp_2273	lp_2274	lp_2273	Endonuclease, resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family.	0.879
lp_2274	lp_2275	lp_2274	lp_2275	Endonuclease, resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Hypothetical protein, DUF965 family; Belongs to the UPF0297 family.	0.986
lp_2274	lp_2276	lp_2274	lp_2276	Endonuclease, resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Hypothetical protein.	0.685
lp_2274	lp_2279	lp_2274	lp_2279	Endonuclease, resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Phosphoesterase, DHH family.	0.435
lp_2274	rhe3	lp_2274	lp_2278	Endonuclease, resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	ATP-dependent RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.	0.480

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