STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2391Hypothetical protein. (109 aa)    
Predicted Functional Partners:
lp_2357
Hypothetical protein, DUF2969 family.
  
     0.718
lp_1136
Oxidoreductase, NAD(P)-dependent.
   
    0.702
lp_1363
Hypothetical protein.
  
    0.697
lp_1583
Hypothetical protein.
  
     0.665
lp_1159
Extracellular protein, membrane-bound.
  
    0.619
hpk7
Two-component system histidine protein kinase; sensor protein.
  
     0.607
lp_0119
NTP pyrophosphohydrolase.
  
    0.598
lp_3322
Hypothetical protein.
  
    0.595
lp_0811
DNA-directed DNA polymerase III, epsilon chain.
   
    0.588
lp_1911
Transcription regulator, MarR family.
   
    0.561
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.