STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2393Lipoprotein precursor. (323 aa)    
Predicted Functional Partners:
lp_2395
ABC transporter, ATP-binding and permease protein.
 
  
 0.974
lp_2394
ABC transporter, ATP-binding and permease protein.
 
  
 0.973
lp_0991
Multidrug transport protein, major facilitator superfamily (MFS).
   
  
 0.864
lp_0990
Hypothetical protein.
   
  
 0.798
lp_0568
Hypothetical protein.
  
    0.735
lp_0992
Transcription regulator, MerR family.
   
  
 0.732
lp_2987
Hypothetical protein.
  
     0.654
lp_2669
Hypothetical protein.
  
     0.610
lp_3448
Acetyltransferase, GNAT family.
  
    0.608
lp_0989
Hypothetical membrane protein.
   
  
 0.599
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.