Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
lp_2437Prophage P2a protein 20, replication protein DnaD domain. (325 aa)    
Predicted Functional Partners:
lp_2433
Prophage P2a protein 24; endodeoxyribonuclease RusA-like.
  
  
 0.959
lp_2432
Prophage P2a protein 25.
  
    0.938
lp_2440
Prophage P2a protein 17.
  
    0.893
lp_2441
Prophage P2a protein 16.
  
    0.887
lp_2439
Prophage P2a protein 18.
  
    0.877
lp_2431
Prophage P2a protein 26.
  
  
 0.854
lp_2430
Prophage P2a protein 27.
  
    0.806
lp_2434
Prophage P2a protein 23.
  
    0.796
lp_2427
Prophage P2a protein 30.
  
    0.782
lp_2446
Prophage P2a protein 11.
   
    0.776
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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