STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2455Prophage P2a protein 2, integrase; Belongs to the 'phage' integrase family. (373 aa)    
Predicted Functional Partners:
lp_1446
Cell surface protein, CscB family.
  
    0.628
lp_2454
Prophage P2a protein 3; DNA adenine methylase.
  
  
 0.584
lp_0631
Prophage P1 protein 8, phage transcription regulator, Cro/CI family.
 
    0.524
lp_2448
Prophage P2a protein 9, phage transcription regulator, Cro/CI family.
 
    0.499
lp_0643
Prophage P1 protein 20.
 
   
 0.492
lp_1997
Integrase, fragment.
  
     0.486
lp_2917
Transport protein, major facilitator superfamily (MFS).
  
    0.448
lp_2453
Prophage P2a protein 4; AAA ATPase.
       0.438
lp_0917
Phage transcription regulator, Cro/CI family.
 
    0.416
lp_0647
Prophage P1 protein 24, holliday junction resolvase.
  
    0.403
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.