STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2474Prophage P2b protein 7, DNA replication. (266 aa)    
Predicted Functional Partners:
lp_2473
Prophage P2b protein 8, helicase.
 
    0.943
lp_2469
Prophage P2b protein 12, endonuclease.
 
    0.854
lp_2475
Prophage P2b protein 6.
  
    0.779
lp_2463
Prophage P2b protein 18, major capsid protein.
  
  
 0.775
lp_2467
Prophage P2b protein 14, terminase small subunit.
  
    0.769
lp_2464
Prophage P2b protein 17, portal protein.
  
    0.761
recX
Regulatory protein recX; Modulates RecA activity; Belongs to the RecX family.
  
  
 0.752
lp_2466
Prophage P2b protein 15, terminase large subunit.
  
    0.752
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
  
 0.745
lp_3382
Prophage P3 protein 8, DNA primase/helicase.
 
    0.638
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.