STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagE4Poly(glycerol-phosphate) alpha-glucosyltransferase. (525 aa)    
Predicted Functional Partners:
lp_2497
Efflux ABC transporter, ATP-binding and permease protein.
 
 
 0.829
lp_2499
ABC transporter, ATP-binding and permease protein.
  
    0.732
lp_2422
Prophage P2a protein 35; terminase large subunit TerL.
   
    0.704
lp_2485
Hypothetical protein, DUF1975 family.
  
 
 0.593
rbsU
Ribose transport protein; Could be involved in the uptake of ribose; Belongs to the GRP transporter (TC 2.A.7.5) family.
   
    0.545
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.526
lp_2066
Hypothetical protein.
  
     0.475
lp_2658
Glycosyltransferase, family 1 (GT1).
  
     0.448
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.414
lp_2911
Membrane-bound protease, CAAX family.
  
     0.412
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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