Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| deoK | deoP | lp_0500 | lp_0498 | Deoxyribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Deoxyribose transporter. | 0.902 |
| deoK | lp_2503 | lp_0500 | lp_2503 | Deoxyribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Sugar transport protein. | 0.474 |
| deoK | rbsK2 | lp_0500 | lp_2251 | Deoxyribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.916 |
| deoP | deoK | lp_0498 | lp_0500 | Deoxyribose transporter. | Deoxyribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.902 |
| deoP | lp_2503 | lp_0498 | lp_2503 | Deoxyribose transporter. | Sugar transport protein. | 0.586 |
| deoP | lp_2826 | lp_0498 | lp_2826 | Deoxyribose transporter. | Dihydrofolate reductase family protein. | 0.508 |
| deoP | rbsK2 | lp_0498 | lp_2251 | Deoxyribose transporter. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.527 |
| lp_2212 | lp_2503 | lp_2212 | lp_2503 | NADH-flavin reductase. | Sugar transport protein. | 0.434 |
| lp_2212 | lp_2826 | lp_2212 | lp_2826 | NADH-flavin reductase. | Dihydrofolate reductase family protein. | 0.537 |
| lp_2503 | deoK | lp_2503 | lp_0500 | Sugar transport protein. | Deoxyribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.474 |
| lp_2503 | deoP | lp_2503 | lp_0498 | Sugar transport protein. | Deoxyribose transporter. | 0.586 |
| lp_2503 | lp_2212 | lp_2503 | lp_2212 | Sugar transport protein. | NADH-flavin reductase. | 0.434 |
| lp_2503 | lp_2504 | lp_2503 | lp_2504 | Sugar transport protein. | SAM-dependent methyltransferase. | 0.468 |
| lp_2503 | lp_2826 | lp_2503 | lp_2826 | Sugar transport protein. | Dihydrofolate reductase family protein. | 0.452 |
| lp_2503 | moaD | lp_2503 | lp_1479 | Sugar transport protein. | Molybdopterin converting factor, small subunit. | 0.438 |
| lp_2503 | pgi | lp_2503 | lp_2502 | Sugar transport protein. | Glucose-6-phosphate isomerase. | 0.756 |
| lp_2503 | pts1BCA | lp_2503 | lp_0185 | Sugar transport protein. | PTS system, oligosucrose-specific EIIBCA component. | 0.450 |
| lp_2503 | pts24BCA | lp_2503 | lp_3133 | Sugar transport protein. | PTS system, beta-glucosides-specific EIIBCA component. | 0.709 |
| lp_2503 | rbsK2 | lp_2503 | lp_2251 | Sugar transport protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.427 |
| lp_2504 | lp_2503 | lp_2504 | lp_2503 | SAM-dependent methyltransferase. | Sugar transport protein. | 0.468 |
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