STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2569Hypothetical protein. (171 aa)    
Predicted Functional Partners:
lp_2568
Short-chain dehydrogenase/oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.786
lp_1342
Short-chain dehydrogenase/oxidoreductase,NAD(P)-dependent.
  
  
 0.752
lp_2567
Transcription regulator, MerR family.
 
    0.673
lp_1310
Glycosyl transferase, group I.
  
    0.657
lp_3114
Mucus-binding protein, LPXTG-motif cell wall anchor.
  
    0.615
lp_1643
Mucus-binding protein precursor, LPXTG-motif cell wall anchor.
  
    0.489
baiE
Bile acid 7-alpha-dehydratase.
  
  
 0.462
lp_1975
Short-chain dehydrogenase/oxidoreductase.
  
    0.426
lp_1949
Hypothetical membrane protein.
  
    0.414
asd2
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
    0.412
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.