STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2585Ferredoxin NAD(P) reductase. (331 aa)    
Predicted Functional Partners:
trxH
Thioredoxin H-type.
  
 
 0.718
trxA1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.705
trxA3
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.698
trxA2
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.671
metS
methionine-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
 
 
 0.665
orf28
Hypothetical protein.
  
 
 0.609
lp_2586
Cell surface hydrolase, DUF915 family,membrane-bound.
  
    0.558
astA
Arylsulfate sulfotransferase.
  
 
 0.526
moeB
Molybdopterin biosynthesis protein MoeB.
  
  
 0.495
tig
Trigger factor / peptidylprolyl isomerase; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
  
 0.457
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.