Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dinG | lp_1777 | lp_1737 | lp_1777 | ATP-dependent helicase DinG; 3'-5' exonuclease. | RNase H-like family protein. | 0.455 |
| dinG | polA | lp_1737 | lp_1508 | ATP-dependent helicase DinG; 3'-5' exonuclease. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.922 |
| dinG | recJ | lp_1737 | lp_2087 | ATP-dependent helicase DinG; 3'-5' exonuclease. | Single-strand DNA-specific exonuclease RecJ. | 0.703 |
| dinG | rnh | lp_1737 | lp_2593 | ATP-dependent helicase DinG; 3'-5' exonuclease. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.476 |
| dinG | rnhB | lp_1737 | lp_1853 | ATP-dependent helicase DinG; 3'-5' exonuclease. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.650 |
| dinG | ssb | lp_1737 | lp_0010 | ATP-dependent helicase DinG; 3'-5' exonuclease. | Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.521 |
| dinG | topA | lp_1737 | lp_1850 | ATP-dependent helicase DinG; 3'-5' exonuclease. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.820 |
| lp_0366 | lp_1777 | lp_0366 | lp_1777 | Ribonuclease H-like protein. | RNase H-like family protein. | 0.900 |
| lp_0366 | polA | lp_0366 | lp_1508 | Ribonuclease H-like protein. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.522 |
| lp_0366 | rnh | lp_0366 | lp_2593 | Ribonuclease H-like protein. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.900 |
| lp_0366 | rnhB | lp_0366 | lp_1853 | Ribonuclease H-like protein. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.572 |
| lp_0366 | ssb | lp_0366 | lp_0010 | Ribonuclease H-like protein. | Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.578 |
| lp_0366 | topA | lp_0366 | lp_1850 | Ribonuclease H-like protein. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.573 |
| lp_1777 | dinG | lp_1777 | lp_1737 | RNase H-like family protein. | ATP-dependent helicase DinG; 3'-5' exonuclease. | 0.455 |
| lp_1777 | lp_0366 | lp_1777 | lp_0366 | RNase H-like family protein. | Ribonuclease H-like protein. | 0.900 |
| lp_1777 | polA | lp_1777 | lp_1508 | RNase H-like family protein. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.537 |
| lp_1777 | rnh | lp_1777 | lp_2593 | RNase H-like family protein. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.902 |
| lp_1777 | rnhB | lp_1777 | lp_1853 | RNase H-like family protein. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.586 |
| lp_1777 | ssb | lp_1777 | lp_0010 | RNase H-like family protein. | Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.581 |
| lp_1777 | topA | lp_1777 | lp_1850 | RNase H-like family protein. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.573 |
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