STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2601Hydrolase, HAD superfamily, Cof family. (256 aa)    
Predicted Functional Partners:
ccpB
Catabolite control protein B / transcription regulator, LacI family.
  
    0.926
ppiB
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
    0.903
lp_2913
Hydrolase, HAD superfamily, Cof family.
 
    0.785
lp_1353
Hydrolase, HAD superfamily, Cof family.
  
    0.783
lp_0824
Hydrolase, HAD superfamily, Cof family.
  
    0.761
lp_3642
ABC transporter, substrate binding protein,mannose-related oligosaccharides.
  
    0.595
lp_2603
Transcription regulator, RpiR family.
  
    0.500
lp_0450
Hypothetical protein, DUF72 family.
      0.406
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.