Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ccpBCatabolite control protein B / transcription regulator, LacI family. (312 aa)    
Predicted Functional Partners:
lp_2601
Hydrolase, HAD superfamily, Cof family.
  
    0.927
lp_3625
Transcription regulator, LacI family.
  
   
 0.925
lp_0173
Transcription regulator, LacI family, maltose related.
  
  
 0.844
rafR
Transcription regulator. LacI family, raffinose related.
  
  
 0.769
galR
Transcription regulator. LacI family, galactose related.
  
     0.716
lacR
Transcription regulator. LacI family, lactose related.
  
  
 0.714
lp_3633
Transcription regulator, GntR family.
  
     0.702
dak2
Dihydroxyacetone phosphotransferase,ADP-binding subunit.
   
    0.697
lp_3649
Transcription regulator, GntR family.
  
    0.683
araR
Transcription regulator, GntR family.
  
     0.640
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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