STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2754Hypothetical membrane protein. (212 aa)    
Predicted Functional Partners:
lp_0335
Hypothetical protein.
  
    0.759
lp_3348
Hypothetical protein.
  
    0.709
lp_3411
Extracellular protein, DUF1002 family.
  
    0.688
lp_2623
Hypothetical protein.
  
    0.676
lp_0340
Hypothetical protein.
  
    0.656
lp_3419
Hypothetical protein.
 
     0.650
lp_2113
Hypothetical protein; Belongs to the HesB/IscA family.
  
    0.640
lp_2641
Hypothetical protein.
 
     0.589
lp_1806
Hypothetical protein, DUF960 family.
  
     0.575
lp_3070
Fe-S cluster biosynthesis protein; Belongs to the HesB/IscA family.
  
     0.527
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.