STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2767Acetyltransferase, GNAT family. (393 aa)    
Predicted Functional Partners:
lp_2766
Hypothetical protein, DUF871 family.
 
    0.950
pts7C
PTS system, cellobiose-specific EIIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
    0.558
lp_2765
Hypothetical protein.
  
    0.462
fabG2
3-ketoacyl-(acyl-carrier-protein) reductase.
       0.461
lp_2763
Nucleotide-binding protein, histidine triad family.
  
    0.456
lp_0249
PTS-associated protein.
 
    0.450
lp_2761
O-acetyltransferase.
  
  
 0.443
lp_3510
PTS-associated protein.
 
    0.437
lp_2762
Phosphohydrolase, MutT/nudix family.
       0.429
lp_2799
Amino acid transport protein.
  
    0.429
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.