STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2768Transport protein, major facilitator superfamily (MFS). (434 aa)    
Predicted Functional Partners:
lp_2920
Proline-containing amino acid or peptide transport protein.
   
    0.702
lp_1768
Muramoyl-tetrapeptide carboxypeptidase, S66 family.
  
    0.698
lp_1803
Transport protein, major facilitator subfamily (MFS).
  
    0.601
lp_1374
Bifunctional protein: homocysteine methyltransferase (cobalamin-dependent); methylenetetrahydrofolate reductase.
  
  
 0.555
lp_3017
Hypothetical protein.
  
    0.521
ropB
Transcription regulator, TetR family.
 
     0.517
metE
Homocysteine S-methyltransferase (cobalamin-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
   
    0.506
lp_3666
Aromatic compound hydratase/decarboxylase.
   
    0.487
lp_2907
Acetyltransferase, GNAT family.
  
     0.470
lp_0098
Adenylyl transferase; Mediates bacterial resistance to the antibiotics streptomycin and spectomycin.
  
   
 0.462
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.