STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2783Glycosyltransferase, family 2. (244 aa)    
Predicted Functional Partners:
tagF1
CDP-glycerol glycerophosphotransferase.
 
  
 0.909
tagE6
Poly(glycerol-phosphate) alpha-glucosyltransferase.
 
  
 0.613
gtcA1
Teichoic acid glycosylation protein.
  
  
 0.597
cps4I
Glycosyltransferase, family 2 (GT2).
  
    0.590
galE1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.554
cps1H
Glycosyltransferase (rhamnosyltransferase),family 2 (GT2).
  
     0.553
gntR
Transcription regulator, GntR family.
  
    0.547
galE2
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.547
tagD2
Glycerol-3-phosphate cytidylyltransferase.
  
  
 0.531
pgm7
Phosphoglycerate mutase family protein; Belongs to the phosphoglycerate mutase family.
 
   0.521
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.