• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
lp_2790 protein (Lactobacillus plantarum) - STRING interaction network
"lp_2790" - annotation not available in Lactobacillus plantarum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2790annotation not available (316 aa)    
Predicted Functional Partners:
serA
annotation not available (392 aa)
   
   
0.876
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (357 aa)
   
 
  0.824
tanL
annotation not available (469 aa)
           
  0.663
pkn1
annotation not available (674 aa)
     
 
  0.661
ribA
GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5’-phosphate (DARP), formate and pyrophosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family (404 aa)
     
   
  0.637
trxB
annotation not available (312 aa)
 
        0.563
comEC
annotation not available (763 aa)
         
  0.471
lp_2038
annotation not available (484 aa)
   
   
  0.471
pbp2x
annotation not available (678 aa)
         
  0.459
pheT
annotation not available (805 aa)
   
        0.445
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (16%) [HD]