STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagE6Poly(glycerol-phosphate) alpha-glucosyltransferase. (514 aa)    
Predicted Functional Partners:
tagE5
Poly(glycerol-phosphate) alpha-glucosyltransferase.
 
  
0.915
lp_2845
Extracellular transglycosylase, with LysM peptidoglycan binding domain.
 
  
 0.783
tagD2
Glycerol-3-phosphate cytidylyltransferase.
  
  
 0.650
lp_1310
Glycosyl transferase, group I.
 
  
 0.622
lp_2783
Glycosyltransferase, family 2.
 
  
 0.613
gtcA1
Teichoic acid glycosylation protein.
     
 0.568
lp_2066
Hypothetical protein.
  
    0.557
acm2
Cell wall hydrolase/muramidase.
   
  
 0.557
tarK
Ribitolphosphotransferase.
  
  
 0.535
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.527
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.