STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2849ABC transporter, ATP-binding protein. (299 aa)    
Predicted Functional Partners:
lp_2850
ABC transporter, permease protein.
  
 0.987
glnQ1
Glutamine ABC transporter, ATP-binding protein.
 
 
   
0.902
glnQ2
Glutamine ABC transporter, ATP-binding protein.
 
 
   
0.897
glnQ3
Glutamine ABC transporter, ATP-binding protein.
 
     
0.894
metN2
D-Methionine-like precursor ABC transporter,ATP binding binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
   
0.894
fhuC
Iron chelatin ABC transporter, ATP-binding protein.
 
     
0.787
glnQ4
Glutamine/histidine ABC transporter,ATP-binding protein.
 
    
0.784
lp_0476
Metal-dependent phosphohydrolase, HD family.
   
    0.704
livC
Branched-chain amino acid ABC transporter,permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
    0.623
purQ
Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]
   
    0.487
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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