Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lp_2872NAD(P)-dependent oxidoreductase, atypical SDR family, subgroup 6. (198 aa)    
Predicted Functional Partners:
lp_2874
Short-chain dehydrogenase/oxidoreductase.
 
    0.806
adh2
Alcohol dehydrogenase, zinc-binding.
  
    0.794
lp_1930
Oxidoreductase, atypical SDR family, subgroup 6.
  
    0.775
lp_2870
Hypothetical protein.
 
    0.658
lp_3117
Cell surface protein, CscC family.
   
    0.598
lp_2871
Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
    0.581
lp_3161
Hypothetical protein.
 
    0.510
hpk7
Two-component system histidine protein kinase; sensor protein.
   
    0.419
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.