STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2877Nucleotide-binding protein, universal stress protein UspA family. (147 aa)    
Predicted Functional Partners:
lp_2745
Nucleotide-binding protein, universal stress protein UspA family.
  
  
 0.771
lp_1701
Nucleotide-binding protein, universal stress protein UspA family.
  
  
 0.759
padR
Transcriptional regulator of phenolic acid metabolism, PadR family.
      
 0.738
lp_1747
Nucleotide-binding protein, universal stress protein UspA family.
  
  
 0.612
maa
Maltose O-acetyltransferase.
  
    0.579
lp_2062
Hypothetical protein, DUF896 family.
  
    0.574
padA
Phenolic acid decarboxylase.
      
 0.552
lp_2243
Type I restriction-modification system,adenine-specific methyltransferase subunit.
  
     0.487
lp_1241
Hypothetical protein, DUF402 family; Belongs to the UPF0374 family.
  
    0.463
lp_0827
Hypothetical protein.
  
    0.448
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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