STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cblA2Cystathionine beta-lyase. (390 aa)    
Predicted Functional Partners:
lp_2889
Hypothetical protein, DUF3737 family.
    0.974
cgs
Cysteine gamma synthase/O-succinylhomoserine (thiol)-lyase.
 
 
 0.927
cblB
Cystathionine beta-lyase / cystathionine gamma-lyase.
 
 
 0.926
cblA3
Cystathionine beta-lyase.
 
 
 
0.920
cblA1
Cystathionine beta-lyase.
  
 
 
0.918
cbs
Cystathionine beta-synthase.
  
 
 0.916
lp_1374
Bifunctional protein: homocysteine methyltransferase (cobalamin-dependent); methylenetetrahydrofolate reductase.
    
 0.916
oahS
O-acetylhomoserine sulfhydrylase.
   
 0.913
metH
Homocysteine S-methyltransferase (cobalamin-dependent).
     
 0.901
metE
Homocysteine S-methyltransferase (cobalamin-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
    
  0.901
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.