STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2920Proline-containing amino acid or peptide transport protein. (455 aa)    
Predicted Functional Partners:
pepR2
Prolyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
 
  
 0.876
lp_1374
Bifunctional protein: homocysteine methyltransferase (cobalamin-dependent); methylenetetrahydrofolate reductase.
 
  
 0.779
lp_2768
Transport protein, major facilitator superfamily (MFS).
   
    0.702
lp_3666
Aromatic compound hydratase/decarboxylase.
   
  
 0.580
lp_1082
Malate / lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
   
    0.544
acm3-C
Cell wall hydrolase/muramidase, C-terminal fragment.
   
    0.515
metE
Homocysteine S-methyltransferase (cobalamin-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
   
  
 0.508
lp_1746
D-methionine ABC transporter, substrate binding protein.
  
    0.497
acm3-M
Cell wall hydrolase/muramidase, middle fragment.
   
    0.465
pucR
Purine transport regulator.
 
    0.459
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.